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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5002699_5003803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5002699 - 5003803

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTCCATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AAAACCATAACA

Flanking Amino Acid:

SHIETRATVKGFLGPEQLPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

60.9

43.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

86.5

0.82

0.8

78.4

34.7

Minor 5ss

34.5

-1.8

2.9

41.3

45.1

Minor BPS

58.5

0.26

1.7

66.56

38.6

Associated Gene:

Gene:

MDH2

Ensembl Gene ID:

ENSAPLG00000004591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004740

4997003 - 5006522

9520