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Intron Name: Anas_platyrhynchos_platyrhynchos_20_500447_503251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

500447 - 503251

Intron Length:

2805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGATGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTCTTGTGATGT

Flanking Amino Acid:

YRTITGECNNRKHSHFGASN

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.5

1.1

61.8

48.3

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

41.2

-0.5

2.4

63.57

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010325

496984 - 509780

12797