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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5006245_5006993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5006245 - 5006993

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGACG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

ATTGCTCCACCT

Flanking Amino Acid:

LAEHNYLSLLDARTQREYNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

63.1

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

26.7

-2.7

2.9

23.8

36.7

Minor BPS

44.1

-0.3

2.1

67.01

43.9

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000005221

5006103 - 5016081

9979