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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5007056_5007496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5007056 - 5007496

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GTGATTTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

AATTCTGTGATT

Flanking Amino Acid:

HIVTARRIEQSPTGEYLVPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

78.8

0.71

67.6

40.6

Major PPT

70.2

0.46

1.1

69.3

45.9

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

53.5

0.19

73.5

37.9

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000005221

5006103 - 5016081

9979