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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5007624_5007832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5007624 - 5007832

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGTG

5'SS Class:

major

3'SS Sequence:

GGTTGCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCTCACTGAAAT

Flanking Amino Acid:

SDDEEEEKEKGSNGSSETEN

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.2

67.3

44.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

75.1

0.57

41.4

Minor 5ss

40.8

-1

3.4

57.9

46.7

Minor BPS

53.1

0.17

1.8

73.24

42.6

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000005221

5006103 - 5016081

9979