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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5010482_5011522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5010482 - 5011522

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

GCTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GCTCTTTTTACA

Flanking Amino Acid:

QVNISEQPSTLFAEDKYLHI

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.79

0.8

79.1

32.9

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

51.5

0.04

1.6

60.63

39.2

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000005221

5006103 - 5016081

9979