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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5015814_5017972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5015814 - 5017972

Intron Length:

2159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAGGTAGA

5'SS Class:

major

3'SS Sequence:

CTCTCGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGTAT

U12 Branch Point Sequence:

GGTATCTGGAGC

Flanking Amino Acid:

RFPVRTTICPDNHKLYKQKL

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.4

60.2

46.2

Major BPS

44.6

-0.3

1.4

38.8

41.4

Major PPT

68.2

0.41

60.3

40.3

Minor 5ss

35.6

-1.6

45.9

42.7

Minor BPS

44.9

-0.4

1.8

52.39

38.7

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922