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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5016783_5017972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5016783 - 5017972

Intron Length:

1190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCTG

5'SS Class:

major

3'SS Sequence:

CTCTCGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGTAT

U12 Branch Point Sequence:

GGTATCTGGAGC

Flanking Amino Acid:

ELQEGYQRIQDNHKLYKQKL

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

55.4

48.8

Major BPS

44.6

-0.3

1.4

38.8

41.4

Major PPT

68.2

0.41

60.3

40.3

Minor 5ss

38.8

-1.3

3.6

55.9

48.3

Minor BPS

44.9

-0.4

1.8

52.39

38.7

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025188

5011523 - 5022926

11404

ENSAPLT00000022369

5011523 - 5032354

20832

ENSAPLT00000005376

5011523 - 5022787

11265