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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5018638_5019256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5018638 - 5019256

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

AGGTGCCCACCG

Flanking Amino Acid:

EMEAYLPKKNGLYLSLVLGN

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

0.79

0.7

31.7

Minor 5ss

31.7

-2.1

3.4

39.1

46.1

Minor BPS

-1.2

2.2

39.46

43.7

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022369

5011523 - 5032354

20832

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000025188

5011523 - 5022926

11404