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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5018638_5019934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5018638 - 5019934

Intron Length:

1297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAA

U12 Branch Point Sequence:

CTTGCTCCAAGC

Flanking Amino Acid:

EMEAYLPKKNGFAYKDEYEK

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

45.2

-0.3

1.4

52.4

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

31.7

-2.1

3.4

39.1

46.1

Minor BPS

42.4

-0.6

2.1

54.53

43.9

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005376

5011523 - 5022787

11265