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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5019317_5019934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5019317 - 5019934

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TGCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAA

U12 Branch Point Sequence:

CTTGCTCCAAGC

Flanking Amino Acid:

VNVTLLSKQAKFAYKDEYEK

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

38.9

Major BPS

45.2

-0.3

1.4

52.4

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

32.7

-2

3.5

42.9

38.3

Minor BPS

42.4

-0.6

2.1

54.53

43.9

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000025188

5011523 - 5022926

11404

ENSAPLT00000022369

5011523 - 5032354

20832