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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5020697_5021198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5020697 - 5021198

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTACAC

U12 Branch Point Sequence:

CACGCCCCAACC

Flanking Amino Acid:

STFLSGVMLTWPDGLMYQMF

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.4

Major BPS

49.2

-0

1.1

58.3

36.8

Major PPT

76.9

0.6

0.7

68.7

31.7

Minor 5ss

41.6

-0.9

3.1

53.5

44.6

Minor BPS

45.1

-0.3

52.33

44.7

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000022369

5011523 - 5032354

20832

ENSAPLT00000005376

5011523 - 5022787

11265