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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5020697_5021443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5020697 - 5021443

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACCC

Flanking Amino Acid:

STFLSGVMLTWLCAVPPVLL

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

79.5

0.66

0.8

72.8

Minor 5ss

41.6

-0.9

3.1

53.5

44.6

Minor BPS

48.9

-0.1

1.9

59.89

45.1

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025188

5011523 - 5022926

11404