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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5021261_5021443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5021261 - 5021443

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTGTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACCC

Flanking Amino Acid:

NQFLSFSMYQSFVQFLQYYY

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.5

37.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

79.5

0.66

0.8

72.8

Minor 5ss

36.6

-1.5

3.3

47.2

42.3

Minor BPS

48.9

-0.1

1.9

59.89

45.1

Associated Gene:

Gene:

TMEM120A

Ensembl Gene ID:

ENSAPLG00000005153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045833

5006103 - 5023024

16922

ENSAPLT00000022369

5011523 - 5032354

20832

ENSAPLT00000005376

5011523 - 5022787

11265