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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5024818_5025003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5024818 - 5025003

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GTGTCCCCACCT

Flanking Amino Acid:

HDGNAHIYVCGDARNMARDV

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

84.4

0.77

0.7

76.2

32.3

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

47.3

-0.1

2.1

69.95

46.3

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005783

5023957 - 5040598

16642

ENSAPLT00000044244

5023957 - 5037056

13100