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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5025090_5025279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5025090 - 5025279

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGCTC

5'SS Class:

major

3'SS Sequence:

TGTTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCCCTCTCACCT

Flanking Amino Acid:

VAFSRDQAEKVYVQHLLKKN

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

58.9

Major BPS

72.7

0.56

30.1

Major PPT

73.2

0.52

66.2

40.7

Minor 5ss

39.8

-1.1

3.6

59.2

45.5

Minor BPS

45.2

-0.2

1.8

56.4

46.2

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642