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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5025426_5026064_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5025426 - 5026064

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGGGACCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

TTAACGTGGACC

Flanking Amino Acid:

IQERAWLKQQGKEVGETVLY

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

59.8

0.22

51.2

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

47.3

-0.2

2.2

64.31

41.1

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642