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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5026333_5026482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5026333 - 5026482

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGCCTCTGACGT

Flanking Amino Acid:

RYYSIASSSKVHPNAIHICA

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

69.1

0.47

60.7

37.6

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

43.4

-0.4

1.9

58.31

44.6

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642