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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5026633_5026792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5026633 - 5026792

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGCT

5'SS Class:

major

3'SS Sequence:

TCCTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAT

U12 Branch Point Sequence:

ATGGGGTCACCG

Flanking Amino Acid:

KMASSSAEGKALYLSWVVEA

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.6

36.5

Major BPS

47.9

-0.1

1.6

59.3

47.1

Major PPT

77.8

0.63

0.7

72.7

25.4

Minor 5ss

26.2

-2.7

3.5

38.7

46.6

Minor BPS

32.6

-1.4

2.4

37.03

45.4

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642