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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5028951_5029597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5028951 - 5029597

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTAAC

U12 Branch Point Sequence:

TAACCCAGAGCT

Flanking Amino Acid:

GRLKSYENQKPPFDAKNPFL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

60.6

38.8

Major BPS

46.7

-0.2

1.4

47.1

44.6

Major PPT

88.9

0.88

0.7

81.1

Minor 5ss

30.4

-2.2

3.1

40.5

38.7

Minor BPS

46.3

-0.2

1.9

66.56

42.8

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642