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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5029697_5030123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5029697 - 5030123

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGTTTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTTCTCTTTCCT

Flanking Amino Acid:

FGVEATGEESSIRQYELVVH

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

73.5

0.53

0.8

65.2

36.3

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

44.8

-0.3

3.6

81.17

40.3

Associated Gene:

Gene:

POR

Ensembl Gene ID:

ENSAPLG00000005585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044244

5023957 - 5037056

13100

ENSAPLT00000005783

5023957 - 5040598

16642