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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5051028_5052876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5051028 - 5052876

Intron Length:

1849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

AGTTCTGGAATA

Flanking Amino Acid:

SAERRASESIKITPPPGSYP

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

72.5

37.3

Major BPS

52.4

0.06

1.2

37.3

Major PPT

67.9

0.4

0.9

61.1

Minor 5ss

34.7

-1.7

3.2

38.7

Minor BPS

48.3

-0.1

2.1

63.17

37.4

Associated Gene:

Gene:

RHBDD2

Ensembl Gene ID:

ENSAPLG00000025011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034534

5048808 - 5054660

5853