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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5053028_5053381_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

5053028 - 5053381

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

TTGCTGGCTTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GCCTCCTTGACG

Flanking Amino Acid:

NICGLLVGEAYGLGYCFCLD

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.2

-0

1.3

50.1

41.8

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

73.2

0.52

69.5

41.6

Minor 5ss

95.2

1.52

0.7

94.3

17.7

Minor BPS

68.3

0.43

1.4

63.23

44.9

Associated Gene:

Gene:

RHBDD2

Ensembl Gene ID:

ENSAPLG00000025011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034534

5048808 - 5054660

5853