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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5075493_5076089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5075493 - 5076089

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACCCGTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACC

Flanking Amino Acid:

GDRGGFKNYGGQRDYGQRSD

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

66.4

0.37

0.8

60.1

34.8

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

75.2

0.77

1.3

81.25

33.5

Associated Gene:

Gene:

TAF15

Ensembl Gene ID:

ENSAPLG00000006217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006502

5027457 - 5081349

53893