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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5078824_5080199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5078824 - 5080199

Intron Length:

1376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTATTCTGATTA

Flanking Amino Acid:

MRGGGGGGRRGSRGGYGRGG

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

76.9

33.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.4

0.75

0.8

77.1

36.6

Minor 5ss

30.1

-2.3

3.1

38.6

46.4

Minor BPS

55.6

0.17

1.7

68.68

37.8

Associated Gene:

Gene:

TAF15

Ensembl Gene ID:

ENSAPLG00000006217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006502

5027457 - 5081349

53893