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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5081420_5093248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5081420 - 5093248

Intron Length:

11829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

ACCCCAATAACT

Flanking Amino Acid:

SLPSCGPDIHQFLQKYGYLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

0.58

0.8

30.9

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

48.6

-0

1.9

66.26

43.7

Associated Gene:

Gene:

MMP28

Ensembl Gene ID:

ENSAPLG00000006470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006714

5081372 - 5099690

18319