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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5095716_5096138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5095716 - 5096138

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTGGTC

5'SS Class:

major

3'SS Sequence:

CTCCCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

GCCCCCACAACC

Flanking Amino Acid:

DGLSNAFDGPGGALAHAFFP

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

60.4

38.7

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

69.8

0.45

0.8

60.6

35.2

Minor 5ss

27.3

-2.6

3.7

40.8

45.8

Minor BPS

46.7

-0.2

1.8

54.21

43.2

Associated Gene:

Gene:

MMP28

Ensembl Gene ID:

ENSAPLG00000006470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027478

5081627 - 5099690

18064

ENSAPLT00000006714

5081372 - 5099690

18319