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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5102275_5102922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5102275 - 5102922

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

GCACCTGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAAAAT

U12 Branch Point Sequence:

CCTGGTGCACCT

Flanking Amino Acid:

QWCRKEMGIKDVLMFETEDL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

48.3

-0.1

1.2

53.2

37.3

Major PPT

0.23

49.8

39.1

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

32.2

-1.2

2.3

46.32

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038998

5101898 - 5105893

3996

ENSAPLT00000037716

5101898 - 5105893

3996