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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5103975_5104325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5103975 - 5104325

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTTCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGTGGCTGAGCC

Flanking Amino Acid:

KHDPCRCTSLSHKQHPRSRP

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

79.1

0.65

0.7

73.6

24.6

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

42.9

-0.5

2.1

52.92

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038998

5101898 - 5105893

3996

ENSAPLT00000037716

5101898 - 5105893

3996

ENSAPLT00000028259

5101898 - 5108031

6134