Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_5109044_5109325_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5109044 - 5109325

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCC

5'SS Class:

major

3'SS Sequence:

CTCACCGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCT

Flanking Amino Acid:

KTIRQQILETRVIGTSETPI

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.5

33.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

63.7

0.31

0.9

53.6

36.5

Minor 5ss

29.1

-2.4

3.7

41.3

45.5

Minor BPS

0.11

1.9

69.41

47.1

Associated Gene:

Gene:

RASL10B

Ensembl Gene ID:

ENSAPLG00000030046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045545

5107233 - 5110359

3127