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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5120234_5127508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5120234 - 5127508

Intron Length:

7275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTCTCTCTGAAG

Flanking Amino Acid:

FQIKDCHLNADTVSSKLQNN

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

78.1

0.63

79.7

26.2

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

49.2

-0.2

1.9

60.18

41.9

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042176

5117399 - 5192139

74741

ENSAPLT00000027761

5117399 - 5192139

74741