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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5126923_5127508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5126923 - 5127508

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAT

U12 Branch Point Sequence:

TGATCGTGATCC

Flanking Amino Acid:

FQIKDCHLNAGI*

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

68.7

0.46

1.3

59.3

47.1

Major PPT

77.9

0.63

0.9

73.9

36.8

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

45.7

-0.3

2.3

61.18

43.5

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007091

5126166 - 5192139

65974