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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5145442_5147261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5145442 - 5147261

Intron Length:

1820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTAACCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTCTTTTTAACC

Flanking Amino Acid:

LGGGIGGSPAVGQTYIPSSV

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.5

38.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

73.2

0.52

0.9

63.2

39.1

Minor 5ss

36.1

-1.6

3.2

50.7

39.7

Minor BPS

78.9

0.89

1.1

81.25

33.5

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027761

5117399 - 5192139

74741

ENSAPLT00000007091

5126166 - 5192139

65974

ENSAPLT00000005917

5123893 - 5192118

68226