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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5147304_5155995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5147304 - 5155995

Intron Length:

8692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAC

U12 Branch Point Sequence:

CTCTCCTTCTCT

Flanking Amino Acid:

DLLGGGLDSLLGSDLGGGIG

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

49.2

-0

1.3

59.4

34.8

Major PPT

0.9

0.6

88.4

21.2

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

44.4

-0.3

3.6

75.16

47.6

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005917

5123893 - 5192118

68226

ENSAPLT00000027761

5117399 - 5192139

74741

ENSAPLT00000007091

5126166 - 5192139

65974