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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5156189_5160154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5156189 - 5160154

Intron Length:

3966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCACCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAACAT

U12 Branch Point Sequence:

TTCCTCCCACCC

Flanking Amino Acid:

HRKHLPIHHGSTDAGDSPVG

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

48.4

-0.1

1.2

54.9

39.1

Major PPT

68.7

0.42

0.8

61.9

27.5

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

42.9

-0.5

56.28

42.1

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042176

5117399 - 5192139

74741

ENSAPLT00000027761

5117399 - 5192139

74741

ENSAPLT00000007091

5126166 - 5192139

65974

ENSAPLT00000005917

5123893 - 5192118

68226