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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5169828_5172006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5169828 - 5172006

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTGA

5'SS Class:

major

3'SS Sequence:

GTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

CTGGCCTCATGT

Flanking Amino Acid:

RLASQANIAQVLAELKEYAT

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.3

65.9

42.7

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

83.4

0.75

0.9

77.1

37.1

Minor 5ss

38.6

-1.3

2.9

48.1

47.4

Minor BPS

43.6

-0.4

2.1

59.35

49.7

Associated Gene:

Gene:

AP2B1

Ensembl Gene ID:

ENSAPLG00000006779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042176

5117399 - 5192139

74741

ENSAPLT00000027761

5117399 - 5192139

74741

ENSAPLT00000007091

5126166 - 5192139

65974

ENSAPLT00000005917

5123893 - 5192118

68226