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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5228892_5229035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5228892 - 5229035

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGGG

5'SS Class:

major

3'SS Sequence:

CTCCACCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

TGTCTCTCCACC

Flanking Amino Acid:

VSQKCSLSYKALVAVRRVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.2

60.8

44.4

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

72.3

0.5

0.8

61.9

34.5

Minor 5ss

35.4

-1.7

3.4

47.6

47.9

Minor BPS

48.9

-0.1

64.67

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039265

5228284 - 5231231

2948

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870