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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5229155_5229824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5229155 - 5229824

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

GTTGCACCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAT

U12 Branch Point Sequence:

TTGTGTTGCACC

Flanking Amino Acid:

STAILPTGSPSLDQLLDSGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

66.9

0.38

0.9

58.5

37.5

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

45.6

-0.3

2.3

62.46

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008535

5228284 - 5234153

5870

ENSAPLT00000031976

5228284 - 5236494

8211