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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5229155_5230357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5229155 - 5230357

Intron Length:

1203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

GCTGCCACATCC

Flanking Amino Acid:

STAILPTGSPRCASASRPAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

75.1

0.57

0.8

65.3

36.2

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

42.3

-0.6

2.1

52.27

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039265

5228284 - 5231231

2948