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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5230493_5230925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5230493 - 5230925

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAG

U12 Branch Point Sequence:

TGCTTTGTCACA

Flanking Amino Acid:

QAQAEDEEEQLEALQRIQVA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.7

86.9

30.2

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

76.9

0.6

0.9

71.4

38.4

Minor 5ss

32.5

-2

3.9

50.4

Minor BPS

44.5

-0.4

2.3

58.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870