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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5231022_5231136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5231022 - 5231136

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

CTGCTCGGCACT

Flanking Amino Acid:

QEVRDRLSQQAVSCTGPLKT

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

89.8

0.89

0.6

85.3

22.1

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

39.3

-0.7

2.3

57.19

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870