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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5231228_5232124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5231228 - 5232124

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGACAC

5'SS Class:

major

3'SS Sequence:

TGTCCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGAAC

U12 Branch Point Sequence:

GAACCCCCAGCA

Flanking Amino Acid:

HPLLGGRQSEGLAVMMQLAR

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

62.1

38.7

Major BPS

49.8

-0

1.5

61.4

43.2

Major PPT

79.2

0.66

0.8

36.5

Minor 5ss

26.4

-2.7

2.9

25.5

36.6

Minor BPS

41.7

-0.6

1.9

49.9

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870