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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5232196_5233093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5232196 - 5233093

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTGCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATGAT

U12 Branch Point Sequence:

TTGGGCATGATG

Flanking Amino Acid:

LAKEFSLAVVVTNQVTRDSS

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

54.3

0.11

1.4

47.7

45.7

Major PPT

62.5

0.28

1.1

57.5

43.2

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

43.2

-0.6

2.1

50.68

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870