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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5233262_5233919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5233262 - 5233919

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTTAA

U12 Branch Point Sequence:

GTGAGGTTAAGC

Flanking Amino Acid:

SASLAKSPRQPTGMQVELDI

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

49.3

-0

1.3

41.2

41.1

Major PPT

0.9

0.6

22.5

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

40.5

-0.7

2.5

51.27

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031976

5228284 - 5236494

8211

ENSAPLT00000008535

5228284 - 5234153

5870