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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5235559_5255095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5235559 - 5255095

Intron Length:

19537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTCGG

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TAATGTATATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

54.5

49.7

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

88.6

0.87

0.7

80.8

31.1

Minor 5ss

31.8

-2.1

3.1

42.4

Minor BPS

43.7

-0.4

2.1

62.61

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041005

5234747 - 5267430

32684

ENSAPLT00000020714

5234450 - 5265793

31344