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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5248353_5255095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5248353 - 5255095

Intron Length:

6743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCTGT

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TAATGTATATTT

Flanking Amino Acid:

ETDIKVTTRTVTMWAGCCNW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.5

40.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

88.6

0.87

0.7

80.8

31.1

Minor 5ss

40.3

-1.1

3.1

52.7

46.4

Minor BPS

43.7

-0.4

2.1

62.61

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021428

5248289 - 5265793

17505