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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5261012_5263422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5261012 - 5263422

Intron Length:

2411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTCT

5'SS Class:

major

3'SS Sequence:

TGTTCCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAGAAT

U12 Branch Point Sequence:

AGAGCAAGAATT

Flanking Amino Acid:

SSSRAQEHQQSTHSGDNLVL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.6

39.6

Major BPS

47.1

-0.1

1.4

53.7

38.6

Major PPT

84.7

0.78

0.8

81.6

30.4

Minor 5ss

37.7

-1.4

3.6

56.7

47.5

Minor BPS

41.4

-0.5

1.9

55.67

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027339

5255096 - 5265793

10698