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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5269335_5270193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5269335 - 5270193

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

CCCCAATACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TCTTCCCCAATA

Flanking Amino Acid:

ASEMDDNGKKTLLDIFTGVK

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

0.72

80.3

31.7

Major PPT

60.3

0.23

0.9

52.9

34.4

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

0.25

1.9

72.38

39.9

Associated Gene:

Gene:

LIG3

Ensembl Gene ID:

ENSAPLG00000008964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009386

5269027 - 5283392

14366