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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5271356_5272436_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5271356 - 5272436

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTGGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTAAA

U12 Branch Point Sequence:

TGTGGCTTAAAG

Flanking Amino Acid:

KTATNLPQLKELYQLSKEKA

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

0.25

1.3

63.9

40.2

Major PPT

57.3

0.17

1.2

52.5

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

51.4

-0

2.1

61.3

46.1

Associated Gene:

Gene:

LIG3

Ensembl Gene ID:

ENSAPLG00000008964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009386

5269027 - 5283392

14366