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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5274780_5275437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5274780 - 5275437

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTGTTTTGCACA

Flanking Amino Acid:

LEGLVLKDIKGNYEPGKRHW

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.7

92.8

13.3

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

79.2

0.66

0.9

75.8

38.1

Minor 5ss

23.6

-3

3.9

35.5

41.2

Minor BPS

49.8

-0

1.9

67.12

39.9

Associated Gene:

Gene:

LIG3

Ensembl Gene ID:

ENSAPLG00000008964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009386

5269027 - 5283392

14366